Pseudomonas protegens Pf-5, PFL_1346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11895
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl00360 Phenylalanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00643 Styrene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00380 Tryptophan metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00627 Aminobenzoate degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00330 Arginine and proline metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01425 Amidase IPR023631 Amidase signature domain 34 465 5.2E-86
SUPERFAMILY SSF75304 Amidase signature (AS) enzymes IPR036928 Amidase signature (AS) superfamily 12 483 1.11E-122
Gene3D G3DSA:3.90.1300.10 Amidase signature (AS) domain IPR036928 Amidase signature (AS) superfamily 8 482 3.1E-126
PANTHER PTHR11895 TRANSAMIDASE IPR000120 Amidase 13 484 3.7E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.