Pseudomonas protegens Pf-5, PFL_1350

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1350
Name
Replicon chromosome
Genomic location 1526874 - 1528031 (+ strand)

Cross-References

RefSeq YP_258479.1
GI 70728730
EC Number 3.1.-.-
Entrez 3475447
INSDC AAY90635.1
NCBI Locus Tag PFL_1350
UniParc UPI000054D089
UniProtKB Acc Q4KH04
UniProtKB ID Q4KH04_PSEF5
UniRef100 UniRef100_Q4KH04
UniRef50 UniRef50_Q4KH04
UniRef90 UniRef90_Q4KH04

Product

Feature Type CDS
Coding Frame 1
Product Name
phospholipase D
Synonyms
Evidence for Translation
Charge (pH 7) 14.05
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 44441.7
Isoelectric Point (pI) 10.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 366 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003934 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1350
Search term: phospholipase D

Human Homologs

References

No references are associated with this feature.