Pseudomonas protegens Pf-5, PFL_3469

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3469
Name
Replicon	chromosome
Genomic location	3986161 - 3987201 (- strand)

Cross-References

RefSeq	YP_260572.2
GI	346643019
Entrez	3475503
INSDC	AAY92736.2
NCBI Locus Tag	PFL_3469
UniParc	UPI000219FF9A
UniProtKB Acc	Q4KB11
UniProtKB ID	Q4KB11_PSEF5
UniRef100	UniRef100_Q4KB11
UniRef50	UniRef50_I3UHC8
UniRef90	UniRef90_Q4KB11

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.64
Kyte-Doolittle Hydrophobicity Value	-0.131
Molecular Weight (kDa)	38.1
Isoelectric Point (pI)	5.22

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000221 (357 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3469 Search term: ABC transporter substrate-binding protein

Human Homologs

References