Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0043565 | sequence-specific DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:SM00342
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
PANTHER | PTHR11019 | HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR | - | - | 17 | 263 | 2.1E-78 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 217 | 263 | 1.39E-8 |
SMART | SM00342 | aracneu4 | IPR018060 | DNA binding HTH domain, AraC-type | 180 | 262 | 3.8E-23 |
Pfam | PF12833 | Helix-turn-helix domain | IPR018060 | DNA binding HTH domain, AraC-type | 186 | 263 | 1.6E-21 |
SUPERFAMILY | SSF51182 | RmlC-like cupins | IPR011051 | RmlC-like cupin domain superfamily | 11 | 189 | 8.6E-21 |
Pfam | PF02311 | AraC-like ligand binding domain | IPR003313 | AraC-type arabinose-binding/dimerisation domain | 34 | 145 | 2.8E-9 |
FunFam | G3DSA:1.10.10.60:FF:000132 | AraC family transcriptional regulator | - | - | 161 | 265 | 6.4E-36 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 231 | 246 | 1.7E-5 |
CDD | cd06124 | cupin_NimR-like_N | - | - | 24 | 119 | 1.73483E-34 |
PRINTS | PR00032 | AraC bacterial regulatory protein HTH signature | IPR020449 | Transcription regulator HTH, AraC- type | 246 | 262 | 1.7E-5 |
Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | IPR014710 | RmlC-like jelly roll fold | 21 | 107 | 6.9E-10 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 161 | 264 | 1.4E-22 |