Pseudomonas protegens Pf-5, PFL_3838

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 246 434 3.7E-21
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 31 392 3.2E-42
PANTHER PTHR43791 PERMEASE-RELATED - - 18 425 1.3E-89
CDD cd17319 MFS_ExuT_GudP_like - - 25 415 8.31623E-88
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 16 223 1.2E-46
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 2 432 6.41E-83
FunFam G3DSA:1.20.1250.20:FF:000018 MFS transporter permease - - 17 223 5.4E-77

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.