Pseudomonas protegens Pf-5, PFL_4843

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4843
Name
Replicon chromosome
Genomic location 5586952 - 5588046 (- strand)

Cross-References

RefSeq YP_261924.1
GI 70732168
Entrez 3479254
INSDC AAY94073.1
NCBI Locus Tag PFL_4843
UniParc UPI000054DDCF
UniProtKB Acc Q4K759
UniProtKB ID Q4K759_PSEF5
UniRef100 UniRef100_Q4K759
UniRef50 UniRef50_A4G4Z1
UniRef90 UniRef90_G8Q6W5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.64
Kyte-Doolittle Hydrophobicity Value 0.159
Molecular Weight (kDa) 38.5
Isoelectric Point (pI) 4.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002161 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4843

Human Homologs

Ensembl 110, assembly GRCh38.p14
NUBP iron-sulfur cluster assembly factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20278]
E-value: 1.5e-69
Percent Identity: 50.4

References

No references are associated with this feature.