Pseudomonas protegens Pf-5, PFL_6075 (tagR)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_6075
Name	tagR
Replicon	chromosome
Genomic location	6896215 - 6897927 (- strand)

Cross-References

RefSeq	YP_263133.1
GI	70733358
Entrez	3480445
INSDC	AAY95263.1
NCBI Locus Tag	PFL_6075
UniParc	UPI000054E272
UniProtKB Acc	Q4K3Q0
UniProtKB ID	Q4K3Q0_PSEF5
UniRef100	UniRef100_Q4K3Q0
UniRef50	UniRef50_Q4K3Q0
UniRef90	UniRef90_Q4K3Q0

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion posttranslational regulatory protein TagR
Synonyms
Evidence for Translation
Charge (pH 7)	-2.31
Kyte-Doolittle Hydrophobicity Value	-0.348
Molecular Weight (kDa)	62248.9
Isoelectric Point (pI)	6.00

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 91 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000070 (413 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_6075 Search term: tagR Search term: type VI secretion posttranslational regulatory protein TagR

Human Homologs

References