Pseudomonas protegens Pf-5, PFL_6077 (tagT)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_6077
Name	tagT
Replicon	chromosome
Genomic location	6899122 - 6899838 (- strand)

Cross-References

RefSeq	YP_263135.1
GI	70733360
Entrez	3480447
INSDC	AAY95265.1
NCBI Locus Tag	PFL_6077
UniParc	UPI000054E274
UniProtKB Acc	Q4K3P8
UniProtKB ID	Q4K3P8_PSEF5
UniRef100	UniRef100_Q4K3P8
UniRef50	UniRef50_G8Q706
UniRef90	UniRef90_Q4K3P8

Product

Feature Type	CDS
Coding Frame	1
Product Name	Lol-like lipoprotein-translocating system, ATP-binding protein TagT
Synonyms
Evidence for Translation
Charge (pH 7)	6.25
Kyte-Doolittle Hydrophobicity Value	-0.059
Molecular Weight (kDa)	25.6
Isoelectric Point (pI)	8.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000072 (411 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_6077 Search term: tagT Search term: Lol-like lipoprotein-translocating system, ATP-binding protein TagT

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000444095 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 1.3e-10 Percent Identity: 31.2
Ensembl 110, assembly GRCh38.p14	ENSP00000265724 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 1.3e-10 Percent Identity: 31.2
Ensembl 110, assembly GRCh38.p14	ENSP00000478255 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 1.3e-10 Percent Identity: 31.2

References