Pseudomonas protegens Pf-5, PFL_6167

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6167
Name
Replicon chromosome
Genomic location 7005770 - 7006255 (+ strand)

Cross-References

RefSeq YP_263225.1
GI 70733450
Entrez 3480537
INSDC AAY95355.1
NCBI Locus Tag PFL_6167
UniParc UPI000054E2CD
UniProtKB Acc Q4K3F8
UniProtKB ID Q4K3F8_PSEF5
UniRef100 UniRef100_Q4K3F8
UniRef50 UniRef50_Q92TG6
UniRef90 UniRef90_K9NS81

Product

Feature Type CDS
Coding Frame 1
Product Name
thioesterase
Synonyms
Evidence for Translation
Charge (pH 7) 2.65
Kyte-Doolittle Hydrophobicity Value -0.386
Molecular Weight (kDa) 18.2
Isoelectric Point (pI) 8.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 351 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005057 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6167
Search term: thioesterase

Human Homologs

Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4
Ensembl 110, assembly GRCh38.p14
acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
E-value: 4.7e-12
Percent Identity: 32.4

References

No references are associated with this feature.