Pseudomonas protegens CHA0, PFLCHA0_c00910 (kinB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00672
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF158472 HAMP domain-like - - 194 243 4.45E-7
Gene3D G3DSA:1.10.287.130 - - - 364 443 2.7E-16
SMART SM00304 HAMP_11 IPR003660 HAMP domain 194 246 1.4E-10
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 359 442 9.02E-17
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 431 594 3.27E-46
Coils Coil Coil - - 483 503 -
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 374 442 1.6E-16
Pfam PF08448 PAS fold IPR013656 PAS fold-4 263 369 3.5E-13
Gene3D G3DSA:1.20.120.880 Histidine kinase (KinB), sensor domain IPR038320 KinB, N-terminal domain superfamily 37 167 1.3E-47
SMART SM00091 pas_2 IPR000014 PAS domain 257 322 3.1E-6
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 556 574 3.3E-19
Gene3D G3DSA:3.30.450.20 PAS domain - - 245 363 1.5E-20
CDD cd19409 KinB_sensor IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 45 156 4.30089E-39
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 375 442 4.2E-12
CDD cd06225 HAMP - - 199 241 1.11032E-7
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 250 366 3.14E-14
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 580 593 3.3E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 525 539 3.3E-19
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 489 594 8.4E-26
CDD cd00075 HATPase - - 493 592 1.04205E-34
CDD cd00130 PAS IPR000014 PAS domain 266 365 2.40796E-6
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 447 594 4.7E-46
PANTHER PTHR44936 SENSOR PROTEIN CREC - - 4 593 1.1E-85
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 256 372 3.7E-11
Gene3D G3DSA:1.10.8.500 HAMP domain in histidine kinase - - 193 244 1.3E-5
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 488 594 5.4E-33
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 543 553 3.3E-19
Pfam PF00672 HAMP domain IPR003660 HAMP domain 192 243 4.0E-9
Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain 39 157 2.0E-31
FunFam G3DSA:3.30.565.10:FF:000006 Sensor histidine kinase WalK - - 447 594 2.0E-37
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 372 438 1.6314E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.