Pseudomonas protegens CHA0, PFLCHA0_c01030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCGCTGGG-N87-CCCAGCGCCG | 105323 | 105429 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CTGTCCCTGG-N93-CCAGGGACAG | 103476 | 103588 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGGTGCCCTGGA-N38-TCCAGGGCACCG | 104167 | 104228 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AGGGAGCTTGCTC-N80-GAGCAAGCTCCCT | 103414 | 103519 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CTGTCCCTGG-N93-CCAGGGACAG | 103476 | 103588 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |