Pseudomonas protegens CHA0, PFLCHA0_c05730 (mutL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0140664 ATP-dependent DNA damage sensor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10073
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006298 mismatch repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00585
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10073
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0032300 mismatch repair complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10073
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00585
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030983 mismatched DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00585
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc03430 Mismatch repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 10 224 3.1E-71
Gene3D G3DSA:3.30.230.10 - IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup 225 335 2.8E-31
Pfam PF08676 MutL C terminal dimerisation domain IPR014790 MutL, C-terminal, dimerisation 445 592 2.0E-50
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 199 338 2.88E-40
FunFam G3DSA:3.30.1370.100:FF:000005 DNA mismatch repair protein MutL - - 492 587 5.3E-49
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 9 211 1.57E-53
NCBIfam TIGR00585 JCVI: DNA mismatch repair endonuclease MutL IPR002099 DNA mismatch repair protein MutL/Mlh/PMS 11 561 0.0
PANTHER PTHR10073 DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL IPR038973 DNA mismatch repair protein MutL/Mlh/Pms-like 451 622 2.4E-124
SMART SM00853 MutL_C_2 IPR014790 MutL, C-terminal, dimerisation 449 592 1.6E-55
Pfam PF01119 DNA mismatch repair protein, C-terminal domain IPR013507 DNA mismatch repair protein, S5 domain 2-like 221 337 2.4E-39
SMART SM01340 DNA_mis_repair_2 IPR013507 DNA mismatch repair protein, S5 domain 2-like 220 338 5.8E-62
Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. IPR020667 DNA mismatch repair protein, MutL 9 632 29.743227
Gene3D G3DSA:3.30.1540.20 - IPR042120 MutL, C-terminal domain, dimerisation subdomain 452 629 1.2E-58
FunFam G3DSA:3.30.230.10:FF:000013 DNA mismatch repair endonuclease MutL - - 225 336 2.8E-53
Gene3D G3DSA:3.30.1370.100 - IPR042121 MutL, C-terminal domain, regulatory subdomain 492 587 1.2E-58
Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - 32 133 2.3E-11
CDD cd16926 HATPase_MutL-MLH-PMS-like - - 18 205 1.49753E-108
FunFam G3DSA:3.30.565.10:FF:000003 DNA mismatch repair endonuclease MutL - - 9 220 1.0E-83
SUPERFAMILY SSF118116 DNA mismatch repair protein MutL IPR037198 MutL, C-terminal domain superfamily 445 634 1.96E-60
CDD cd03482 MutL_Trans_MutL - - 224 337 7.77604E-68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.