Pseudomonas protegens CHA0, PFLCHA0_c12950 (capB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00050	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	IPR012340	Nucleic acid-binding, OB-fold	3	68	3.92E-24
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	1	69	7.6E-28
PANTHER	PTHR46565	COLD SHOCK DOMAIN PROTEIN 2	-	-	2	66	6.5E-20
FunFam	G3DSA:2.40.50.140:FF:000006	Cold shock protein CspC	-	-	4	69	2.6E-29
CDD	cd04458	CSP_CDS	IPR002059	Cold-shock protein, DNA-binding	5	68	1.30186E-28
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	27	36	2.6E-16
Pfam	PF00313	'Cold-shock' DNA-binding domain	IPR002059	Cold-shock protein, DNA-binding	6	68	4.5E-29
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	7	22	2.6E-16
PIRSF	PIRSF002599	Cold_shock_A	IPR012156	Cold shock, CspA	1	69	6.5E-23
SMART	SM00357	csp_8	IPR011129	Cold shock domain	6	69	5.4E-26
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	42	60	2.6E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.