Pseudomonas protegens CHA0, PFLCHA0_c13020 (argT2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pprc02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 1 | 253 | 1.22E-63 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 113 | 211 | 2.0E-73 |
| PANTHER | PTHR35936 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F | - | - | 6 | 252 | 5.8E-47 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 29 | 249 | 2.0E-73 |
| Pfam | PF00497 | Bacterial extracellular solute-binding proteins, family 3 | IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF | 28 | 252 | 1.1E-57 |
| SMART | SM00062 | AABind_6 | IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF | 27 | 254 | 4.2E-60 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.