Pseudomonas protegens CHA0, PFLCHA0_c13180 (pdxH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0008615 pyridoxine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01629
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004733 pyridoxamine-phosphate oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01629
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010181 FMN binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01629
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00750 Vitamin B6 metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00558 JCVI: pyridoxamine 5'-phosphate oxidase IPR000659 Pyridoxamine 5'-phosphate oxidase 25 215 5.4E-79
Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal 175 215 4.2E-19
PANTHER PTHR10851 PYRIDOXINE-5-PHOSPHATE OXIDASE IPR000659 Pyridoxamine 5'-phosphate oxidase 5 215 4.8E-74
SUPERFAMILY SSF50475 FMN-binding split barrel - - 8 215 1.53E-65
Gene3D G3DSA:2.30.110.10 - IPR012349 FMN-binding split barrel 2 215 3.3E-83
PIRSF PIRSF000190 Pyd_amn-ph_oxd IPR000659 Pyridoxamine 5'-phosphate oxidase 1 215 1.9E-80
Pfam PF01243 Pyridoxamine 5'-phosphate oxidase IPR011576 Pyridoxamine 5'-phosphate oxidase, putative 46 122 8.9E-26
FunFam G3DSA:2.30.110.10:FF:000011 Chromosome 7, whole genome shotgun sequence - - 14 215 1.6E-93
Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. IPR000659 Pyridoxamine 5'-phosphate oxidase 11 215 38.530113

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.