Pseudomonas protegens CHA0, PFLCHA0_c19730 (abcA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 62 251 5.3E-12
PANTHER PTHR46743:SF2 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 6 396 9.3E-106
CDD cd03220 ABC_KpsT_Wzt IPR015860 ABC transporter, teichoic acids export TagH-like 8 239 3.14561E-103
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 54 185 2.0E-18
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 45 246 7.39E-44
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 294 434 1.59907E-24
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 293 418 2.2E-20
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 39 283 5.2E-43
Gene3D G3DSA:2.70.50.60 - - - 284 424 1.3E-24
PANTHER PTHR46743 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 6 396 9.3E-106

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.