Pseudomonas protegens CHA0, PFLCHA0_c19750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05239
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009226 nucleotide-sugar biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd05239
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.720 - - - 1 276 1.5E-100
Pfam PF01370 NAD dependent epimerase/dehydratase family IPR001509 NAD-dependent epimerase/dehydratase 1 223 3.3E-62
CDD cd05239 GDP_FS_SDR_e IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase 1 290 0.0
PANTHER PTHR43238 GDP-L-FUCOSE SYNTHASE - - 1 291 2.4E-98
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 2 293 3.16E-67
Hamap MF_00956 GDP-L-fucose synthase [fcl]. IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase 1 291 39.374527
Gene3D G3DSA:3.90.25.10 - - - 154 290 1.5E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.