Pseudomonas protegens CHA0, PFLCHA0_c32730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 286 306 -
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 131 351 2.2E-25
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 175 208 0.022
PANTHER PTHR45586 TPR REPEAT-CONTAINING PROTEIN PA4667 - - 167 341 9.2E-14
Pfam PF14559 Tetratricopeptide repeat - - 157 210 9.7E-6
SUPERFAMILY SSF48371 ARM repeat IPR016024 Armadillo-type fold 51 149 9.05E-6
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 141 347 2.44E-19
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 243 276 190.0
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 277 310 71.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.