Pseudomonas protegens CHA0, PFLCHA0_c38640

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF13404	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30154	LEUCINE-RESPONSIVE REGULATORY PROTEIN	-	-	1	144	3.6E-31
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	4	59	9.22E-14
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	21	32	5.7E-12
SMART	SM00344	asnc	IPR019888	Transcription regulator AsnC-like	5	113	1.1E-19
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	32	51	5.7E-12
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	5	21	5.7E-12
Gene3D	G3DSA:3.30.70.920	-	-	-	63	145	1.7E-14
Pfam	PF01037	Lrp/AsnC ligand binding domain	IPR019887	Transcription regulator AsnC/Lrp, ligand binding domain	83	142	1.0E-16
Pfam	PF13404	AsnC-type helix-turn-helix domain	IPR000485	AsnC-type HTH domain	5	46	8.1E-14
Coils	Coil	Coil	-	-	28	48	-
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	2	58	2.1E-17
SUPERFAMILY	SSF54909	Dimeric alpha+beta barrel	IPR011008	Dimeric alpha-beta barrel	69	144	1.1E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.