Pseudomonas protegens CHA0, PFLCHA0_c38730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.20.20.450 | EAL domain | IPR035919 | EAL domain superfamily | 26 | 274 | 2.5E-51 |
| Pfam | PF00563 | EAL domain | IPR001633 | EAL domain | 36 | 263 | 1.1E-38 |
| PANTHER | PTHR33121 | CYCLIC DI-GMP PHOSPHODIESTERASE PDEF | - | - | 40 | 264 | 3.0E-36 |
| SUPERFAMILY | SSF141868 | EAL domain-like | IPR035919 | EAL domain superfamily | 36 | 264 | 9.68E-50 |
| CDD | cd01948 | EAL | IPR001633 | EAL domain | 36 | 264 | 1.83064E-55 |
| SMART | SM00052 | duf2_2 | IPR001633 | EAL domain | 30 | 268 | 1.5E-20 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.