Pseudomonas protegens CHA0, PFLCHA0_c38780 (luxQ3)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13426 PAS domain IPR000014 PAS domain 283 385 2.3E-10
Gene3D G3DSA:3.30.450.20 PAS domain - - 264 380 6.2E-25
Gene3D G3DSA:3.40.50.2300 - - - 654 776 3.2E-28
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 406 470 2.0E-21
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 261 384 1.01E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 587 605 1.5E-16
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 611 624 1.5E-16
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 655 769 7.8E-25
SMART SM00091 pas_2 IPR000014 PAS domain 271 338 4.5E-5
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 572 582 1.5E-16
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 392 471 3.34E-20
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 656 773 5.69E-27
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 522 625 1.25914E-37
CDD cd00130 PAS IPR000014 PAS domain 282 383 9.59133E-15
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE - - 218 762 3.6E-103
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 406 470 2.0E-16
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 404 466 7.1038E-15
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 469 627 6.1E-41
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 518 625 1.1E-23
CDD cd19410 HK9-like_sensor - - 58 172 2.52017E-16
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 554 568 1.5E-16
Gene3D G3DSA:1.10.287.130 - - - 381 468 3.0E-26
Gene3D G3DSA:6.10.340.10 - - - 174 263 8.3E-6
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 49 180 3.5E-22
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 459 625 1.44E-44
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 517 627 1.1E-34
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 267 392 1.1E-21
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 657 765 1.0E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.