Pseudomonas protegens CHA0, PFLCHA0_c41150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47384
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 43 173 4.9E-15
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 314 428 1.3E-16
Gene3D G3DSA:1.10.287.130 - - - 439 511 2.9E-19
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 603 617 2.2E-17
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 698 804 1.6E-15
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 553 674 3.7E-24
SMART SM00091 pas_2 IPR000014 PAS domain 45 109 87.0
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 169 292 2.62E-14
SMART SM00086 pac_2 IPR001610 PAC motif 117 161 130.0
Gene3D G3DSA:3.30.450.20 PAS domain - - 186 309 2.7E-17
Pfam PF08447 PAS fold IPR013655 PAS fold-3 340 410 2.3E-14
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 54 151 8.03E-6
SMART SM00086 pac_2 IPR001610 PAC motif 389 425 0.011
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 445 508 2.47199E-11
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 634 652 2.2E-17
SMART SM00091 pas_2 IPR000014 PAS domain 180 247 8.9
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 436 510 5.1E-12
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 449 510 9.8E-10
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 693 810 2.42E-27
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 323 427 4.99E-22
SMART SM00086 pac_2 IPR001610 PAC motif 252 294 9.4
Coils Coil Coil - - 291 318 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 554 672 2.5E-16
CDD cd00130 PAS IPR000014 PAS domain 326 422 4.68857E-18
Gene3D G3DSA:3.30.450.20 PAS domain - - 319 422 3.3E-22
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 621 631 2.2E-17
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 658 671 2.2E-17
SMART SM00091 pas_2 IPR000014 PAS domain 317 383 1.5E-11
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 447 512 1.1E-11
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 502 672 3.41E-36
Pfam PF08448 PAS fold IPR013656 PAS fold-4 187 295 1.9E-14
Gene3D G3DSA:3.40.50.2300 - - - 696 814 3.2E-24
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 695 805 1.8E-22
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 513 677 1.8E-39
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 188 301 2.5E-5
PANTHER PTHR43065 SENSOR HISTIDINE KINASE - - 314 674 2.2E-75
CDD cd00156 REC - - 698 778 3.13574E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.