Pseudomonas protegens CHA0, PFLCHA0_c41240 (ndvB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF74650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0030246 carbohydrate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF74650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF74650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.50.10.140 - - - 1009 1213 1.0E-41
SUPERFAMILY SSF74650 Galactose mutarotase-like IPR011013 Galactose mutarotase-like domain superfamily 2086 2348 1.0E-92
SMART SM01068 CBM_X_2 IPR009342 Putative carbohydrate binding domain 1578 1639 1.8E-24
Pfam PF06165 Glycosyltransferase family 36 IPR010383 Glycosyl hydrolase 94 2108 2347 2.0E-86
PANTHER PTHR37469 CELLOBIONIC ACID PHOSPHORYLASE-RELATED - - 229 1993 0.0
Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IPR033432 Glycosyl hydrolase 36, catalytic domain 2378 2803 3.7E-114
SUPERFAMILY SSF74650 Galactose mutarotase-like IPR011013 Galactose mutarotase-like domain superfamily 1586 1854 1.19E-85
Gene3D G3DSA:1.50.10.140 - - - 1286 1564 2.6E-58
Pfam PF10091 Putative glucoamylase IPR019282 Glycoamylase-like, conserved domain 1338 1535 8.7E-15
CDD cd11753 GH94N_ChvB_NdvB_2_like IPR037820 NdvB, GH94N domain 1 1543 1878 0.0
SUPERFAMILY SSF48208 Six-hairpin glycosidases IPR008928 Six-hairpin glycosidase superfamily 2368 2871 8.84E-95
CDD cd11756 GH94N_ChvB_NdvB_1_like IPR037824 NdvB, GH94N domain 2 2080 2363 0.0
PANTHER PTHR37469 CELLOBIONIC ACID PHOSPHORYLASE-RELATED - - 2268 2874 0.0
Gene3D G3DSA:1.50.10.10 - IPR012341 Six-hairpin glycosidase-like superfamily 2393 2797 0.0
Pfam PF06165 Glycosyltransferase family 36 IPR010383 Glycosyl hydrolase 94 1602 1851 2.6E-79
Gene3D G3DSA:2.60.420.10 Maltose phosphorylase, domain 3 - - 2798 2873 6.9E-20
Gene3D G3DSA:2.70.98.40 - IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily 2086 2382 2.3E-105
SMART SM01068 CBM_X_2 IPR009342 Putative carbohydrate binding domain 2085 2150 1.5E-31
PANTHER PTHR37469 CELLOBIONIC ACID PHOSPHORYLASE-RELATED - - 2087 2249 0.0
Gene3D G3DSA:2.70.98.40 - IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily 1586 1885 1.1E-91

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.