Pseudomonas protegens CHA0, PFLCHA0_c46170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01544
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030001 metal ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01544
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01544
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046873 metal ion transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01544
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.58.340 Magnesium transport protein CorA, transmembrane region - - 168 294 1.1E-13
SUPERFAMILY SSF144083 Magnesium transport protein CorA, transmembrane region IPR045863 CorA, transmembrane region 290 352 1.19E-15
CDD cd12834 ZntB_u1 - - 66 355 4.40837E-128
Coils Coil Coil - - 269 289 -
Pfam PF01544 CorA-like Mg2+ transporter protein IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB 64 348 2.0E-47
Gene3D G3DSA:3.30.460.20 - - - 22 165 7.1E-29
SUPERFAMILY SSF143865 CorA soluble domain-like IPR045861 CorA, cytoplasmic domain 32 288 2.22E-33
Gene3D G3DSA:1.20.58.340 Magnesium transport protein CorA, transmembrane region - - 298 354 8.8E-15
PANTHER PTHR46494 CORA FAMILY METAL ION TRANSPORTER (EUROFUNG) - - 37 353 4.8E-30

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.