Pseudomonas protegens CHA0, PFLCHA0_c50280 (oprD13)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AAAGCCGCTGA-N2-TCAGCGGCTTT 5634488 5634511 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 1313 5634491 5634508 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GGCTGACCAG-N79-CTGGTCAGCC 5635278 5635376 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Inverted repeat: TCGGCGCTGT-N66-ACAGCGCCGA 5635667 5635752 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: AAAAAGACCAGCA-N5-TGCTGGTCTTTTT 5635951 5635981 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 1314 5635956 5635976 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details