Pseudomonas protegens CHA0, PFLCHA0_c56370

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 249 432 3.1E-48
SMART SM00267 duf1_3 IPR000160 GGDEF domain 248 431 3.3E-39
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 263 432 2.28E-38
CDD cd01949 GGDEF IPR000160 GGDEF domain 259 429 9.38901E-42
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 258 426 3.6E-30
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 256 366 4.8E-24
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 250 434 2.0E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.