Pseudomonas protegens CHA0, PFLCHA0_c60410

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
TIGRFAM	TIGR03349	IV_VI_DotU: type IV/VI secretion system protein, DotU family	IPR017732	Type IV / VI secretion system, DotU	58	267	6.1E-74
Gene3D	G3DSA:1.25.40.590	Type IV / VI secretion system, DotU	IPR038522	Type IV / VI secretion system, DotU superfamily	56	213	1.3E-48
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	331	429	2.2E-15
Pfam	PF09850	Type VI secretion system protein DotU	IPR017732	Type IV / VI secretion system, DotU	59	261	1.2E-68
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	289	440	3.3E-41
TIGRFAM	TIGR03350	type_VI_ompA: type VI secretion system peptidoglycan-associated domain	IPR017733	Type VI secretion system peptidoglycan-associated domain	299	435	6.7E-51
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	57	439	2.4E-79
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	50	-
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	331	435	3.98806E-34
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	403	423	-
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	1	18	-
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	320	435	2.88E-28
PANTHER	PTHR30329:SF4	MOTILITY PROTEIN B	-	-	57	439	2.4E-79
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	27	45	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.