Pseudomonas protegens CHA0, PFLCHA0_c60450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 237 267 -
Pfam PF06812 ImpA, N-terminal, type VI secretion system IPR010657 ImpA, N-terminal 3 126 2.6E-34
Coils Coil 184 204 -
TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family IPR017740 Type VI secretion system-associated, ImpA 2 331 8.8E-83

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.