Pseudomonas protegens CHA0, PFLCHA0_c60490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF04965 | Baseplate wedge protein gp25 | IPR007048 | IraD/Gp25-like | 51 | 153 | 3.9E-22 |
| TIGRFAM | TIGR03357 | VI_zyme: type VI secretion system lysozyme-like protein | IPR017737 | Type VI secretion system protein TssE1-like | 23 | 173 | 3.1E-31 |
| SUPERFAMILY | SSF160719 | gpW/gp25-like | - | - | 50 | 164 | 2.48E-10 |
| PANTHER | PTHR38595 | CYTOPLASMIC PROTEIN-RELATED | - | - | 18 | 173 | 1.0E-48 |
| PANTHER | PTHR38595:SF1 | CYTOPLASMIC PROTEIN-RELATED | - | - | 18 | 173 | 1.0E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.