Pseudomonas protegens CHA0, PFLCHA0_c60640 (ubiC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008813 chorismate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01632
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006744 ubiquinone biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01632
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01632
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1410.10 - IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 9 173 2.5E-45
Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. IPR007440 Chorismate--pyruvate lyase 7 175 25.371254
SUPERFAMILY SSF64288 Chorismate lyase-like IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily 5 173 2.28E-48
Pfam PF04345 Chorismate lyase IPR007440 Chorismate--pyruvate lyase 8 175 1.2E-51
PANTHER PTHR38683 CHORISMATE PYRUVATE-LYASE IPR007440 Chorismate--pyruvate lyase 8 174 6.9E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.