Pseudomonas protegens CHA0, PFLCHA0_c60680 (phoR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00989
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02966
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004721 phosphoprotein phosphatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11808
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00082
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02966
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02966
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02966
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF11808 Phosphate regulon sensor protein PhoR IPR021766 Phosphate regulon sensor protein PhoR 19 104 2.3E-26
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 217 251 2.49786E-9
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 219 286 1.4E-19
CDD cd00130 PAS IPR000014 PAS domain 121 213 1.25454E-6
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 368 382 2.5E-10
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 290 446 3.4E-35
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 205 286 1.28E-21
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 427 440 2.5E-10
SMART SM00091 pas_2 IPR000014 PAS domain 112 178 7.1E-4
FunFam G3DSA:3.30.450.20:FF:000076 Phosphate regulon sensor histidine kinase PhoR - - 96 214 1.3E-75
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 219 285 5.6E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 386 396 2.5E-10
Coils Coil Coil - - 246 266 -
Pfam PF00989 PAS fold IPR013767 PAS fold 114 168 4.6E-7
PANTHER PTHR45453 PHOSPHATE REGULON SENSOR PROTEIN PHOR - - 23 444 0.0
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 275 439 7.07E-40
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 331 443 1.7E-32
Gene3D G3DSA:3.30.450.20 PAS domain - - 118 213 5.5E-9
FunFam G3DSA:3.30.565.10:FF:000032 Phosphate regulon sensor histidine kinase PhoR - - 292 446 2.5E-61
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 332 440 1.5E-22
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 403 421 2.5E-10
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 123 218 4.19E-9
NCBIfam TIGR02966 JCVI: phosphate regulon sensor histidine kinase PhoR IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR 108 439 0.0
Gene3D G3DSA:1.10.287.130 - - - 214 285 1.7E-21
FunFam G3DSA:1.10.287.130:FF:000001 Two-component sensor histidine kinase - - 215 287 1.1E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.