Pseudomonas poae RE_1-1-14, H045_01510

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 327 494 2.3E-53
Gene3D G3DSA:3.30.450.20 PAS domain - - 192 280 2.2E-18
CDD cd12915 PDC2_DGC_like - - 193 289 2.38554E-19
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 318 493 9.7E-59
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 337 492 2.9E-47
Pfam PF02743 Cache domain IPR033479 Double Cache domain 1 46 278 4.8E-12
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 213 495 5.5E-70
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 332 490 7.7E-50
SMART SM00267 duf1_3 IPR000160 GGDEF domain 321 494 2.0E-65
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 329 492 2.4E-51
CDD cd12914 PDC1_DGC_like - - 66 191 8.27815E-20
CDD cd01949 GGDEF IPR000160 GGDEF domain 334 492 1.74894E-63
Gene3D G3DSA:3.30.450.20 PAS domain - - 38 189 2.3E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.