Pseudomonas poae RE_1-1-14, H045_08635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppz00680 | Methane metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz00620 | Pyruvate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz01200 | Carbon metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz00010 | Glycolysis / Gluconeogenesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz01130 | Biosynthesis of antibiotics | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppz00640 | Propanoate metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56801 | Acetyl-CoA synthetase-like | - | - | 28 | 541 | 0.0 |
| PANTHER | PTHR43605 | ACYL-COENZYME A SYNTHETASE | - | - | 42 | 542 | 7.9E-130 |
| Pfam | PF13193 | AMP-binding enzyme C-terminal domain | IPR025110 | AMP-binding enzyme, C-terminal domain | 452 | 530 | 3.7E-24 |
| Gene3D | G3DSA:3.30.300.30 | - | IPR045851 | AMP-binding enzyme, C-terminal domain superfamily | 439 | 548 | 2.0E-28 |
| Gene3D | G3DSA:3.40.50.12780 | - | IPR042099 | ANL, N-terminal domain | 5 | 438 | 9.7E-96 |
| FunFam | G3DSA:3.30.300.30:FF:000005 | Acyl-coenzyme A synthetase ACSM5, mitochondrial | - | - | 439 | 542 | 9.2E-40 |
| Pfam | PF00501 | AMP-binding enzyme | IPR000873 | AMP-dependent synthetase/ligase domain | 40 | 443 | 4.3E-71 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.