Pseudomonas poae RE_1-1-14, H045_10480

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF12833	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01965	DJ-1/PfpI family	IPR002818	DJ-1/PfpI	2	174	1.1E-27
Pfam	PF12833	Helix-turn-helix domain	IPR018060	DNA binding HTH domain, AraC-type	235	314	7.0E-21
Gene3D	G3DSA:1.10.10.60	-	-	-	271	316	7.9E-10
SMART	SM00342	aracneu4	IPR018060	DNA binding HTH domain, AraC-type	229	312	2.6E-24
CDD	cd03137	GATase1_AraC_1	-	-	4	190	4.24028E-77
Gene3D	G3DSA:3.40.50.880	-	IPR029062	Class I glutamine amidotransferase-like	1	202	9.3E-66
PANTHER	PTHR43130	ARAC-FAMILY TRANSCRIPTIONAL REGULATOR	-	-	3	252	1.1E-56
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	266	315	2.02E-10
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	214	263	1.34E-8
SUPERFAMILY	SSF52317	Class I glutamine amidotransferase-like	IPR029062	Class I glutamine amidotransferase-like	1	192	1.7E-54
Gene3D	G3DSA:1.10.10.60	-	-	-	212	270	1.9E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.