Pseudomonas poae RE_1-1-14, H045_11480 (cysS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00840
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006418 tRNA aminoacylation for protein translation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47323
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004817 cysteine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47323
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47323
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47323
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006423 cysteinyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00041
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppz00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd07963 Anticodon_Ia_Cys - - 306 457 2.09243E-72
PRINTS PR00983 Cysteinyl-tRNA synthetase signature IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase 25 36 1.6E-30
Hamap MF_00041 Cysteine--tRNA ligase [cysS]. IPR015803 Cysteine-tRNA ligase 2 459 38.831985
PANTHER PTHR10890 CYSTEINYL-TRNA SYNTHETASE IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase 2 459 0.0
Pfam PF09190 DALR domain IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR 340 401 5.3E-20
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 1 302 0.0
NCBIfam TIGR00435 JCVI: cysteine--tRNA ligase IPR015803 Cysteine-tRNA ligase 2 457 0.0
CDD cd00672 CysRS_core IPR032678 tRNA synthetases class I, catalytic domain 3 305 2.63631E-125
FunFam G3DSA:3.40.50.620:FF:000009 Cysteine--tRNA ligase - - 1 303 0.0
PRINTS PR00983 Cysteinyl-tRNA synthetase signature IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase 222 243 1.6E-30
PRINTS PR00983 Cysteinyl-tRNA synthetase signature IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase 191 209 1.6E-30
Pfam PF01406 tRNA synthetases class I (C) catalytic domain IPR032678 tRNA synthetases class I, catalytic domain 15 313 0.0
Gene3D G3DSA:1.20.120.1910 - - - 303 458 6.4E-40
PRINTS PR00983 Cysteinyl-tRNA synthetase signature IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase 61 70 1.6E-30
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 2 313 1.02E-102
SUPERFAMILY SSF47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding 316 458 5.89E-39
SMART SM00840 dalr_2_4 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR 340 401 3.3E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.