Pseudomonas poae RE_1-1-14, H045_20305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02803
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30558
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30558
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.420.270 | - | - | - | 63 | 132 | 1.3E-20 |
| NCBIfam | TIGR02803 | JCVI: TonB system transport protein ExbD | IPR014170 | TonB system transport protein ExbD type-1 | 15 | 136 | 1.9E-66 |
| PANTHER | PTHR30558 | EXBD MEMBRANE COMPONENT OF PMF-DRIVEN MACROMOLECULE IMPORT SYSTEM | IPR003400 | Biopolymer transport protein ExbD/TolR | 14 | 137 | 2.8E-28 |
| Pfam | PF02472 | Biopolymer transport protein ExbD/TolR | IPR003400 | Biopolymer transport protein ExbD/TolR | 14 | 133 | 3.8E-30 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.