Pseudomonas denitrificans ATCC 13867, H681_00450

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pdr01212	Fatty acid metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr00071	Fatty acid degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr00061	Fatty acid biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF13193	AMP-binding enzyme C-terminal domain	IPR025110	AMP-binding enzyme, C-terminal domain	452	526	4.8E-20
Gene3D	G3DSA:3.40.50.12780	-	IPR042099	ANL, N-terminal domain	8	438	5.5E-114
SUPERFAMILY	SSF56801	Acetyl-CoA synthetase-like	-	-	15	538	0.0
Gene3D	G3DSA:3.30.300.30	-	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	439	537	2.9E-29
CDD	cd05936	FC-FACS_FadD_like	-	-	21	533	0.0
Pfam	PF00501	AMP-binding enzyme	IPR000873	AMP-dependent synthetase/ligase domain	26	443	1.0E-101
PANTHER	PTHR43767	LONG-CHAIN-FATTY-ACID--COA LIGASE	-	-	17	533	4.0E-125
FunFam	G3DSA:3.30.300.30:FF:000006	Long-chain-fatty-acid--CoA ligase FadD	-	-	438	539	3.9E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.