Pseudomonas denitrificans ATCC 13867, H681_00455

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF09339	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF09339	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SMART	SM00346	iclrneu	IPR005471	Transcription regulator IclR, N-terminal	17	107	7.2E-21
Pfam	PF01614	Bacterial transcriptional regulator	IPR014757	Transcription regulator IclR, C-terminal	137	257	2.0E-12
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	9	87	1.9E-19
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	17	91	8.14E-13
Pfam	PF09339	IclR helix-turn-helix domain	IPR005471	Transcription regulator IclR, N-terminal	19	66	1.2E-14
SUPERFAMILY	SSF55781	GAF domain-like	-	-	84	257	2.35E-36
PANTHER	PTHR30136	HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY	-	-	8	258	2.3E-53
Gene3D	G3DSA:3.30.450.40	-	IPR029016	GAF-like domain superfamily	88	259	1.6E-37

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.