Pseudomonas denitrificans ATCC 13867, H681_00500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.1220.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.1220.10 - IPR013321 Arc-type ribbon-helix-helix 5 51 2.4E-5
SUPERFAMILY SSF48092 Transcription factor STAT-4 N-domain IPR036535 STAT transcription factor, N-terminal domain superfamily 15 67 8.5E-12
CDD cd22233 RHH_CopAso-like - - 3 46 1.97748E-13
Pfam PF01402 Ribbon-helix-helix protein, copG family IPR002145 Ribbon-helix-helix protein, CopG 5 42 9.7E-11
PANTHER PTHR40688 - - - 2 72 2.1E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.