Pseudomonas denitrificans ATCC 13867, H681_00585

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000271 polysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01479
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00483
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005976 polysaccharide metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01050
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00483 Nucleotidyl transferase IPR005835 Nucleotidyl transferase domain 4 293 2.2E-51
FunFam G3DSA:3.90.550.10:FF:000046 Mannose-1-phosphate guanylyltransferase (GDP) - - 2 357 2.5E-123
Gene3D G3DSA:2.60.120.10 Jelly Rolls IPR014710 RmlC-like jelly roll fold 354 460 1.2E-16
Pfam PF01050 Mannose-6-phosphate isomerase IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal 322 472 4.0E-67
NCBIfam TIGR01479 JCVI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 476 0.0
SUPERFAMILY SSF51182 RmlC-like cupins IPR011051 RmlC-like cupin domain superfamily 188 476 2.11E-75
Gene3D G3DSA:3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A IPR029044 Nucleotide-diphospho-sugar transferases 2 353 1.5E-113
CDD cd02509 GDP-M1P_Guanylyltransferase - - 2 285 2.41911E-122
CDD cd02213 cupin_PMI_typeII_C - - 343 470 2.05963E-70
SUPERFAMILY SSF53448 Nucleotide-diphospho-sugar transferases IPR029044 Nucleotide-diphospho-sugar transferases 2 286 8.32E-68
PANTHER PTHR46390 MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE - - 2 471 0.0
FunFam G3DSA:2.60.120.10:FF:000032 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase - - 354 471 9.8E-55

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.