Pseudomonas denitrificans ATCC 13867, H681_01105

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00883	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00883	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR00883	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.20.1250.20	MFS general substrate transporter like domains	IPR036259	MFS transporter superfamily	12	218	1.3E-32
SUPERFAMILY	SSF103473	MFS general substrate transporter	IPR036259	MFS transporter superfamily	20	427	2.22E-63
Pfam	PF00083	Sugar (and other) transporter	IPR005828	Major facilitator, sugar transporter-like	228	425	2.9E-11
FunFam	G3DSA:1.20.1250.20:FF:000095	Alpha-ketoglutarate permease	-	-	17	431	0.0
Pfam	PF00083	Sugar (and other) transporter	IPR005828	Major facilitator, sugar transporter-like	22	219	6.3E-24
NCBIfam	TIGR00883	JCVI: metabolite/H+ symporter	IPR004736	MFS transporter, metabolite:H symporter	28	414	0.0
Gene3D	G3DSA:1.20.1250.20	MFS general substrate transporter like domains	IPR036259	MFS transporter superfamily	219	431	2.7E-21
PANTHER	PTHR43528	ALPHA-KETOGLUTARATE PERMEASE	-	-	2	432	0.0
CDD	cd17367	MFS_KgtP	-	-	22	426	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.