Pseudomonas denitrificans ATCC 13867, H681_12955
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0015562 | efflux transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.1600.10 | Outer membrane efflux proteins (OEP) | - | - | 40 | 496 | 9.5E-51 |
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 284 | 464 | 1.1E-19 |
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 61 | 258 | 7.5E-18 |
| PANTHER | PTHR30026 | OUTER MEMBRANE PROTEIN TOLC | - | - | 18 | 370 | 4.0E-29 |
| SUPERFAMILY | SSF56954 | Outer membrane efflux proteins (OEP) | - | - | 6 | 465 | 3.14E-56 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.