Pseudomonas denitrificans ATCC 13867, H681_12985 (codB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30569
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0015209 | cytosine transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30569
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF02133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02133
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30569 | CYTOSINE TRANSPORTER CODB | IPR030191 | Cytosine permease | 3 | 411 | 4.4E-64 |
| CDD | cd11484 | SLC-NCS1sbd_CobB-like | - | - | 13 | 404 | 7.99996E-97 |
| Pfam | PF02133 | Permease for cytosine/purines, uracil, thiamine, allantoin | IPR001248 | Purine-cytosine permease | 25 | 356 | 4.3E-17 |
| Gene3D | G3DSA:1.10.4160.10 | Hydantoin permease | - | - | 6 | 416 | 1.6E-52 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.