Pseudomonas denitrificans ATCC 13867, H681_15760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_15760
Name
Replicon chromosome
Genomic location 3563026 - 3563544 (+ strand)

Cross-References

RefSeq YP_007658560.1
GI 472326314
Entrez 14997278
NCBI Locus Tag H681_15760

Product

Feature Type CDS
Coding Frame 1
Product Name
2'-5' RNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) 3.09
Kyte-Doolittle Hydrophobicity Value -0.163
Molecular Weight (kDa) 19154.8
Isoelectric Point (pI) 8.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 140 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG024993 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_15760
Search term: 2'-5' RNA ligase

Human Homologs

References

No references are associated with this feature.