Pseudomonas denitrificans ATCC 13867, H681_24790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 9 341 5.4E-21
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 71 99 19.0
NCBIfam TIGR04247 JCVI: nitrous oxide reductase family maturation protein NosD IPR026464 Nitrous oxide reductase family maturation protein NosD 25 407 0.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 279 300 67.0
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 25 173 6.5E-19
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 302 340 1100.0
Pfam PF05048 Periplasmic copper-binding protein (NosD) IPR007742 Periplasmic copper-binding protein NosD, beta helix domain 130 343 5.1E-52
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 123 152 560.0
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 24 395 5.03E-55
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 179 354 6.3E-28
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 101 122 240.0
NCBIfam TIGR03804 JCVI: parallel beta-helix repeat (two copies) IPR022441 Parallel beta-helix repeat-2 275 316 8.3E-6
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 153 174 3.7
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 197 218 4800.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 175 196 500.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 219 241 480.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.