Pseudomonas denitrificans ATCC 13867, H681_24815 (uvrD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr03430 Mismatch repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr03420 Nucleotide excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51198 UvrD-like DNA helicase ATP-binding domain profile. IPR014016 UvrD-like helicase, ATP-binding domain 10 288 54.157
Gene3D G3DSA:3.40.50.300 283 638 3.9E-128
Gene3D G3DSA:1.10.486.10 385 540 3.9E-128
Pfam PF00580 UvrD/REP helicase N-terminal domain IPR034739 UvrD/AddA helicase, N-terminal 12 274 7.6E-72
Gene3D G3DSA:3.40.50.300 12 275 8.1E-98
CDD cd18807 SF1_C_UvrD 287 616 4.02121E-31
Gene3D G3DSA:1.10.10.160 IPR013986 DExx box DNA helicase domain superfamily 116 189 8.1E-98
CDD cd17932 DEXQc_UvrD 16 285 3.67916E-85
ProSiteProfiles PS51217 UvrD-like DNA helicase C-terminal domain profile. IPR014017 UvrD-like DNA helicase, C-terminal 289 566 25.271
Pfam PF13361 UvrD-like helicase C-terminal domain IPR014017 UvrD-like DNA helicase, C-terminal 279 618 3.1E-73
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 9 644 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.