Pseudomonas aeruginosa LESB58, PALES_00841

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35850 CYTOPLASMIC PROTEIN-RELATED IPR008312 Type VI secretion system sheath protein TssB1 4 169 1.6E-69
NCBIfam TIGR03358 JCVI: type VI secretion system contractile sheath small subunit IPR008312 Type VI secretion system sheath protein TssB1 8 163 1.5E-55
Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 IPR008312 Type VI secretion system sheath protein TssB1 12 162 2.1E-57
PIRSF PIRSF028301 UCP028301 IPR008312 Type VI secretion system sheath protein TssB1 3 172 7.7E-59

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.