Pseudomonas aeruginosa LESB58, PALES_01781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other LESB58 genes in this class
Adaptation, Protection Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Chemotaxis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR22617 CHEMOTAXIS SENSOR HISTIDINE KINASE-RELATED IPR039315 Chemotaxis protein CheW 7 160 3.3E-42
CDD cd00732 CheW - - 14 152 3.85689E-42
Gene3D G3DSA:2.40.50.180 - - - 34 143 2.0E-39
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 15 151 1.8E-35
FunFam G3DSA:2.40.50.180:FF:000002 Chemotaxis protein CheW - - 34 101 3.7E-26
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 17 142 2.0E-39
SMART SM00260 chew_2 IPR002545 CheW-like domain 11 148 1.5E-41
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 13 153 1.07E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.