Pseudomonas aeruginosa LESB58, PALES_01811

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004888 transmembrane signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other LESB58 genes in this class
Chemotaxis Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Chemotactic transducer (MCP) ECO:0000037
not_recorded
PseudoCAP Chemotaxis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00283 MA_2 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 95 351 3.5E-5
PANTHER PTHR32089 METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB - - 155 314 1.2E-33
Gene3D G3DSA:1.10.287.950 - - - 60 339 1.1E-41
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 224 253 1.4E-16
Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 315 4.3E-28
SUPERFAMILY SSF58104 Methyl-accepting chemotaxis protein (MCP) signaling domain - - 88 334 3.27E-37
PRINTS PR00260 Bacterial chemotaxis sensory transducer signature IPR004090 Chemotaxis methyl-accepting receptor 195 222 1.4E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.