Pseudomonas aeruginosa LESB58, PALES_15161

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00928
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009152 purine ribonucleotide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00928
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Aromatic compound catabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 268 287 -
PANTHER PTHR43172 ADENYLOSUCCINATE LYASE - - 2 449 8.8E-124
FunFam G3DSA:1.20.200.10:FF:000014 3-carboxy-cis,cis-muconate cycloisomerase - - 3 363 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 232 259 8.6E-24
MobiDBLite mobidb-lite consensus disorder prediction - - 457 471 -
SMART SM00998 ADSL_C_2 IPR019468 Adenylosuccinate lyase C-terminal 366 445 2.4E-25
MobiDBLite mobidb-lite consensus disorder prediction - - 273 287 -
PRINTS PR00145 Argininosuccinate lyase family signature - - 277 293 2.4E-10
Gene3D G3DSA:1.10.40.30 - - - 366 450 1.3E-21
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 277 293 8.6E-24
PRINTS PR00145 Argininosuccinate lyase family signature - - 101 123 2.4E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 447 477 -
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 102 120 8.6E-24
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 11 444 6.28E-116
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 3 363 1.7E-104
PRINTS PR00145 Argininosuccinate lyase family signature - - 232 256 2.4E-10
Pfam PF10397 Adenylosuccinate lyase C-terminus IPR019468 Adenylosuccinate lyase C-terminal 367 442 1.1E-15
NCBIfam TIGR00928 JCVI: adenylosuccinate lyase IPR004769 Adenylosuccinate lyase 15 444 2.5E-98
CDD cd01597 pCLME - - 10 447 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 147 165 8.6E-24
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 17 298 5.2E-42
PRINTS PR00145 Argininosuccinate lyase family signature - - 142 162 2.4E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.